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Jeanne-Marie Perotin, Lisa Gauquelin, Nicolas Just, Gilles Devouassoux, Cécile Chenivesse, et al.. Severe asthma care trajectories: the French RAMSES cohort. ERJ Open Research, 2024, 10 (2), pp.00837-2023. ⟨10.1183/23120541.00837-2023⟩. ⟨hal-04557190⟩

Ana Elena Pérez-Cobas, Christophe Ginevra, Christophe Rusniok, Sophie Jarraud, Carmen Buchrieser. The respiratory tract microbiome, the pathogen load, and clinical interventions define severity of bacterial pneumonia. Cell Reports Medicine, 2023, 4 (9), pp.101167. ⟨10.1016/j.xcrm.2023.101167⟩. ⟨pasteur-04558958⟩

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Marta Nunes, Edward Thommes, Holger Fröhlich, Antoine Flahault, Julien Arino, et al.. Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report. Infectious Disease Modelling, 2024, 9 (2), pp.501-518. ⟨10.1016/j.idm.2024.02.008⟩. ⟨hal-04551033⟩

Damien Potheret, Cedric Badiou, Frédéric Laurent, Alan Diot. Investigating the response of mitochondria to an intracellular infection of osteoblasts by Staphylococcus aureus. MitOX 2019 - Annual meeting on cancer metabolism, neuroscience, diabetes, mitochondrial biology, Apr 2019, Oxford, United Kingdom. ⟨hal-04547020⟩

Camille de Cevins, Laure Delage, Maxime Batignes, Quentin Riller, Marine Luka, et al.. Single-cell RNA-sequencing of PBMCs from SAVI patients reveals disease-associated monocytes with elevated integrated stress response. Cell Reports Medicine, 2023, 4 (12), pp.101333. ⟨10.1016/j.xcrm.2023.101333⟩. ⟨hal-04546943⟩

Antoine Rebendenne, Priyanka Roy, Boris Bonaventure, Ana Luiza Chaves Valadão, Lowiese Desmarets, et al.. Bidirectional genome-wide CRISPR screens reveal host factors regulating SARS-CoV-2, MERS-CoV and seasonal HCoVs. Nature Genetics, 2022, 54 (8), pp.1090-1102. ⟨10.1038/s41588-022-01110-2⟩. ⟨hal-03739796⟩

Arthur Tron, Vincent Schlegel, Juliette Pinot, Sébastien Bruel, Marie Ecollan, et al.. Barriers and facilitators to the HPV vaccine: a multicenter qualitative study of French general practitioners. Archives of Public Health, 2024, 82 (1), pp.2. ⟨10.1186/s13690-023-01227-8⟩. ⟨hal-04543986⟩

Marion Cremoni, Sébastien Cuozzo, Emanuela Martinuzzi, Susana Barbosa, Nadia Ben Hassen, et al.. Low T Cell Responsiveness in the Early Phase of COVID-19 Associates with Progression to Severe Pneumonia in Kidney Transplant Recipients. Viruses, 2022, 14 (3), pp.542. ⟨10.3390/v14030542⟩. ⟨hal-04543471⟩

Camille Cosson, Romane Riou, Danish Patoli, Tingting Niu, Amaury Rey, et al.. Functional diversity of NLRP3 gain-of-function mutants associated with CAPS autoinflammation. Journal of Experimental Medicine, 2024, 221 (5), pp.e20231200. ⟨10.1084/jem.20231200⟩. ⟨hal-04536945⟩

Alexandre Belot, Gillian Rice, Sulliman Ommar Omarjee, Quentin Rouchon, Eve Smith, et al.. Contribution of rare and predicted pathogenic gene variants to childhood-onset lupus: a large, genetic panel analysis of British and French cohorts. The Lancet Rheumatology, 2020, 2 (2), pp.e99-e109. ⟨10.1016/S2665-9913(19)30142-0⟩. ⟨hal-02867795⟩

Delphine Planas, Isabelle Staropoli, Vincent Michel, Frederic Lemoine, Flora Donati, et al.. Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion. Nature Communications, 2024, 15 (1), pp.2254. ⟨10.1038/s41467-024-46490-7⟩. ⟨pasteur-04530809⟩

Melyssa Yaugel Novoa. Role of the humoral immune response in the pathophysiology of COVID-19. Human health and pathology. Université Jean Monnet - Saint-Etienne, 2023. English. ⟨NNT : 2023STET0028⟩. ⟨tel-04520464⟩

Delphine Staumont-Sallé, Sébastien Barbarot, Jean David Bouaziz, Chan Chan, Claire Clibborn, et al.. Effect of abrocitinib and dupilumab on eosinophil levels in patients with moderate‐to‐severe atopic dermatitis. JEADV Clinical Practice, 2023, 2 (3), pp.518-530. ⟨10.1002/jvc2.192⟩. ⟨hal-04247793⟩

Hamideh Salehi, Anuradha Ramoji, Said Mougari, Peggy Merida, Aymeric Neyret, et al.. Specific intracellular signature of SARS-CoV-2 infection using confocal Raman microscopy. Communications Chemistry, 2022, 5 (1), pp.85. ⟨10.1038/s42004-022-00702-7⟩. ⟨hal-03854468⟩

Oumar Ndiaye, Cheikh Tidiane Diagne, Ahmed Abd El Wahed, Fatou Dia, Moussa Dia, et al.. Use of Envelope Domain III Protein for the Detection of IgG Type Antibodies Specific to Zika Virus by Indirect ELISA. Diagnostics, 2023, 13 (3), ⟨10.3390/diagnostics13030462⟩. ⟨hal-04514302⟩

Jonathan Lopez, Marine Mommert, William Mouton, Andrés Pizzorno, Karen Brengel-Pesce, et al.. Early nasal type I IFN immunity against SARS-CoV-2 is compromised in patients with autoantibodies against type I IFNs. Journal of Experimental Medicine, 2021, 218 (10), ⟨10.1084/jem.20211211⟩. ⟨hal-03537904⟩

Kahina Saker, Bruno Pozzetto, Vanessa Escuret, Virginie Pitiot, Amélie Massardier-Pilonchéry, et al.. Evaluation of commercial Anti-SARS-CoV-2 neutralizing antibody assays in seropositive subjects. Journal of Clinical Virology, 2022, 152, pp.105169. ⟨10.1016/j.jcv.2022.105169⟩. ⟨hal-03699350⟩

Noémie Aurine, Théo La Rosa, Camille Baquerre, Marion Ferren, Cyrille Mathieu, et al.. Generation of Human and Equine cerebral organoids from iPSCs: tools to study neurotropic viruses. FSSCR 2021 ANNUAL MEETING, Nov 2021, Montpellier, France. ⟨hal-04506051⟩

Marta Nunes, Edward Thommes, Holger Fröhlich, Antoine Flahault, Julien Arino, et al.. Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report. Infectious Disease Modelling, 2024, 9 (2), pp.501-518. ⟨10.1016/j.idm.2024.02.008⟩. ⟨hal-04551033⟩

Camille Cosson, Romane Riou, Danish Patoli, Tingting Niu, Amaury Rey, et al.. Functional diversity of NLRP3 gain-of-function mutants associated with CAPS autoinflammation. Journal of Experimental Medicine, 2024, 221 (5), pp.e20231200. ⟨10.1084/jem.20231200⟩. ⟨hal-04536945⟩

Florian Lecuelle, Wendy Leslie, Marie-Paule Gustin, Patricia Franco, Benjamin Putois. Treatment for behavioral insomnia in young children with neurotypical development under 6 years of age: A systematic review. Sleep Medicine Reviews, 2024, 74, pp.101909. ⟨10.1016/j.smrv.2024.101909⟩. ⟨hal-04495137⟩

Delphine Planas, Isabelle Staropoli, Vincent Michel, Frederic Lemoine, Flora Donati, et al.. Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion. Nature Communications, 2024, 15 (1), pp.2254. ⟨10.1038/s41467-024-46490-7⟩. ⟨pasteur-04530809⟩

Thi Nhu Thao Nguyen, Madge Martin, C Arpin, Samuel Bernard, Olivier Gandrillon, et al.. In silico modelling of CD8 T cell immune response links genetic regulation to population dynamics. 2024. ⟨hal-04489553⟩

Hayley S. Clements, Emmanuel Do Linh San, Gareth Hempson, Birthe Linden, Bryan Maritz, et al.. The bii4africa dataset of faunal and floral population intactness estimates across Africa’s major land uses. Scientific Data , 2024, 11, pp.191. ⟨10.1038/s41597-023-02832-6⟩. ⟨hal-04484669⟩

Célia Bernard, Charlotte Joly Kukla, Ignace Rakotoarivony, Maxime Duhayon, Frédéric Stachurski, et al.. Detection of Crimean–Congo haemorrhagic fever virus in Hyalomma marginatum ticks, southern France, May 2022 and April 2023. Eurosurveillance, 2024, 29 (6), pp.2400023. ⟨10.2807/1560-7917.ES.2024.29.6.2400023⟩. ⟨hal-04449145⟩

Mathis Larrieu, Delphine Mouniee, Géraldine Agusti, Didier Blaha, David Edouard. Antimicrobial foam-filter based on commercial support coated with polydopamine and silver nanoparticles for water treatment. Environmental Technology and Innovation, 2024, 33, pp.103468. ⟨10.1016/j.eti.2023.103468⟩. ⟨hal-04395650⟩

Sophie Landre, Florence Ader, Olivier Epaulard, Pierre Tattevin, Jean-Paul Stahl, et al.. Encephalitis in HIV-negative immunodeficient patients: a prospective multicentre study, France, 2016 to 2019. Eurosurveillance, 2024, Euro Surveillance : Bulletin Europeen Sur Les Maladies Transmissibles = European, 29 (6), pp.08. ⟨10.2807/1560-7917.ES.2024.29.6.2300046⟩. ⟨hal-04483604⟩

Laurène Meyniel-Schicklin, Jérôme Amaudrut, Pierre Mallinjoud, Fabrice Guillier, Philippe E Mangeot, et al.. Viruses traverse the human proteome through peptide interfaces that can be biomimetically leveraged for drug discovery. Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (5), pp.e2308776121. ⟨10.1073/pnas.2308776121⟩. ⟨hal-04411218⟩